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@OHDSI

Observational Health Data Sciences and Informatics

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  1. CommonDataModel CommonDataModel Public

    Definition and DDLs for the OMOP Common Data Model (CDM)

    HTML 927 458

  2. Vocabulary-v5.0 Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    PLpgSQL 232 75

  3. Atlas Atlas Public

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    JavaScript 279 141

  4. Cyclops Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    C++ 39 32

  5. CohortMethod CohortMethod Public

    An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

    R 82 60

  6. PatientLevelPrediction PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    R 190 90

Repositories

Showing 10 of 321 repositories
  • WebAPI Public

    OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications

    OHDSI/WebAPI’s past year of commit activity
    Java 135 Apache-2.0 170 128 (1 issue needs help) 24 Updated Mar 12, 2025
  • Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    OHDSI/Cyclops’s past year of commit activity
    C++ 39 32 20 1 Updated Mar 12, 2025
  • Atlas Public

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    OHDSI/Atlas’s past year of commit activity
    JavaScript 279 Apache-2.0 141 214 (1 issue needs help) 20 Updated Mar 12, 2025
  • CohortDiagnostics Public

    An R package for performing various cohort diagnostics.

    OHDSI/CohortDiagnostics’s past year of commit activity
    R 43 50 28 (1 issue needs help) 2 Updated Mar 12, 2025
  • webapi-shiny Public

    [Under development] Holds dependencies for WebAPI Shiny apps

    OHDSI/webapi-shiny’s past year of commit activity
    R 1 Apache-2.0 0 0 0 Updated Mar 12, 2025
  • EvidenceSynthesis Public

    An R package for combining evidence from multiple sources (e.g. multiple data sites)

    OHDSI/EvidenceSynthesis’s past year of commit activity
    R 8 8 3 (1 issue needs help) 0 Updated Mar 12, 2025
  • drat Public

    drat repository for OHDSI R packages

    OHDSI/drat’s past year of commit activity
    5 7 0 0 Updated Mar 12, 2025
  • Hades Public

    Health Analytics Data-to-Evidence Suite (HADES): A collection of R packages for performing analytics against the Common Data Model.

    OHDSI/Hades’s past year of commit activity
    R 24 Apache-2.0 13 15 (3 issues need help) 5 Updated Mar 12, 2025
  • SelfControlledCaseSeries Public

    An R package for performing Self-Controlled Case Series (SCCS) analyses in an observational database in the OMOP Common Data Model.

    OHDSI/SelfControlledCaseSeries’s past year of commit activity
    R 13 8 15 0 Updated Mar 12, 2025
  • Broadsea Public

    Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.

    OHDSI/Broadsea’s past year of commit activity
    R 79 Apache-2.0 64 46 5 Updated Mar 11, 2025
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