phoenix_v1.0.1
This release is not backwards compatible with v0.x.x pipeline results
This version is not backwards compatible with previous versions. Previous results need to be deleted before the use of a v1.x.x pipeline. If you do not remove the previous results, there will be two tasks attempting to copy the same fastq, due to a copy fastq task name change.
Minor release update containing pairoscope and star-fusion changes. Updated required scripts readme with script locations.
CMD Changes - Will cause restarts
- Updated mm_igtx_pairoscope_calling_b38.py to the latest version and fixed numLines call in mm_igtx_calling.jst
- star-fusion has a new cp in place for copying an intermediate file to be used later with fusion validator