new module: Souporcell #8636
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new module: Souporcell #8636
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* Add metacache query module * Update snapshots * Add untar tag * Update the assert in nf-test * Updated authors * Add path db as stage * Add optional output * Update meta * Update modules/nf-core/metacache/query/main.nf Co-authored-by: Gullumluvl <[email protected]> * Update modules/nf-core/metacache/query/main.nf Co-authored-by: Gullumluvl <[email protected]> * Update modules/nf-core/metacache/query/main.nf Co-authored-by: Gullumluvl <[email protected]> * Update modules/nf-core/metacache/query/main.nf Co-authored-by: Gullumluvl <[email protected]> * Update modules/nf-core/metacache/query/main.nf Co-authored-by: Gullumluvl <[email protected]> * Update modules/nf-core/metacache/query/meta.yml Co-authored-by: Gullumluvl <[email protected]> * Apply review suggestions * Apply review suggestions * Update nf-test * Move setup outside * Add tests --------- Co-authored-by: Gullumluvl <[email protected]>
…tion, easycgc, easysubstrate) (nf-core#8216) * add rundbcan tool and subcommands * add rundbcan tool and subcommands * fix duplicated package * Delete modules/nf-core/rundbcan/rundbcan-nf-modules directory * rewrite all scripts and update the dbcan version * Delete modules/nf-core/rundbcan directory * fix github commit issue * Delete modules/nf-core/rundbcan directory * Delete modules/nf-core/rundbcan directory * fix meta.yml and process with lint * revise test nf script; revise main.nf based on suggestion to avoid overlapping * revise all scripts (change the output path, revise meta.yml, and fix issues) * revise with all comments; add version function * try to fix lint issue * revise easysubstrate test * fix version issue * Update modules/nf-core/rundbcan/cazymeannotation/tests/main.nf.test Co-authored-by: Simon Pearce <[email protected]> * fix whitespace and alignment issues; fix name issues; remove single_end from meta files * fix issues;add version in cazymeannoation(missed before) * update scripts;update dbcan codes and version to fix previous issues * update dbcan version from 5.1.1 to 5.1.2 to avoid nf-core issues; fix previous issues --------- Co-authored-by: Simon Pearce <[email protected]>
nictru
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Jun 14, 2025
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PR checklist
Closes #5074
versions.ymlfile.labelnf-core modules test <MODULE> --profile dockernf-core modules test <MODULE> --profile singularitynf-core modules test <MODULE> --profile conda