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    97 repositories

    • nextflow

      Public
      A DSL for data-driven computational pipelines
      dockergroovyhelloawscloudpipelinehpcreproducible-researchworkflow-engineslurm
      Groovy
      •
      Apache License 2.0
      •670•2.9k•443•69•Updated Mar 15, 2025Mar 15, 2025

    • vscode-language-nextflow

      Public
      Nextflow language support for Visual Studio Editor
      nextflowvscode-extension
      TypeScript
      •
      MIT License
      •16•34•6•7•Updated Mar 15, 2025Mar 15, 2025

    • summit-website

      Public
      TypeScript
      •5•2•1•1•Updated Mar 14, 2025Mar 14, 2025

    • website

      Public
      Nextflow public web site
      HTML
      •106•8•2•10•Updated Mar 14, 2025Mar 14, 2025

    • plugins

      Public
      Nextflow plugins index repository
      25•2•3•0•Updated Mar 13, 2025Mar 13, 2025

    • nf-prov

      Public
      Groovy
      •
      Apache License 2.0
      •12•29•9•0•Updated Mar 13, 2025Mar 13, 2025

    • nf-co2footprint

      Public
      [WIP] A Nextflow plugin to estimate the CO2 footprint of pipeline runs.
      Groovy
      •
      Apache License 2.0
      •8•19•8•5•Updated Mar 13, 2025Mar 13, 2025

    • training

      Public
      Nextflow training material
      traininglearningworkshopnextflowpipelinesteachingworkflowstutorial
      Nextflow
      •
      Other
      •156•151•27•11•Updated Mar 12, 2025Mar 12, 2025

    • language-server

      Public
      The Nextflow language server
      nextflowlanguage-server-protocol
      Java
      •
      Apache License 2.0
      •0•18•25•8•Updated Mar 11, 2025Mar 11, 2025

    • nextflow-plugin-gradle

      Public
      Gradle plugin for making Nextflow plugins
      Groovy
      •
      Apache License 2.0
      •0•0•0•0•Updated Mar 6, 2025Mar 6, 2025

    • nf-hello

      Public template
      Nextflow plugin implementation skeleton
      Groovy
      •
      Apache License 2.0
      •26•10•4•2•Updated Mar 6, 2025Mar 6, 2025

    • nf-google

      Public
      Nextflow plugin providing the support for Google cloud
      Apache License 2.0
      •1•0•0•0•Updated Mar 4, 2025Mar 4, 2025

    • nf-schema

      Public
      Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines
      Groovy
      •
      Apache License 2.0
      •25•18•21•2•Updated Feb 27, 2025Feb 27, 2025

    • k8s-fuse-plugin

      Public
      Kubernetes device plugin for using /dev/fuse without privileged flag
      Go
      •
      Apache License 2.0
      •0•11•4•0•Updated Feb 20, 2025Feb 20, 2025

    • nf-parquet

      Public
      Plugin implementing the support for Apache Parquet files (experimental)
      nextflowparquet
      Groovy
      •
      Apache License 2.0
      •2•3•0•0•Updated Feb 19, 2025Feb 19, 2025

    • schema-spec

      Public
      Specification of Nextflow schema
      Shell
      •
      Apache License 2.0
      •1•3•2•0•Updated Feb 18, 2025Feb 18, 2025

    • nf-tower

      Public
      Nextflow plugin providing the support for Tower
      Mozilla Public License 2.0
      •1•1•0•0•Updated Feb 12, 2025Feb 12, 2025

    • nf-wave

      Public
      Wave provisioning containers plugin for Nextflow
      2•0•5•0•Updated Feb 12, 2025Feb 12, 2025

    • nf-azure

      Public
      Azure cloud plugin for Nextflow
      Apache License 2.0
      •1•2•0•0•Updated Feb 12, 2025Feb 12, 2025

    • nf-amazon

      Public
      Amazon Web Services plugin for Nextflow
      Apache License 2.0
      •2•1•1•0•Updated Feb 12, 2025Feb 12, 2025

    • schema-builder

      Public
      TypeScript
      •0•1•0•0•Updated Feb 4, 2025Feb 4, 2025

    • nf-nomad

      Public
      Hashicorp Nomad executor plugin for Nextflow
      Groovy
      •
      Apache License 2.0
      •4•3•8•1•Updated Jan 31, 2025Jan 31, 2025

    • nf-sqldb

      Public
      SQL support plugin for Nextflow
      Groovy
      •
      Apache License 2.0
      •1•26•7•4•Updated Jan 28, 2025Jan 28, 2025

    • doom

      Public
      A Nextflow pipeline to play Doom
      pipelinenextflowdoom
      Nextflow
      •
      GNU General Public License v3.0
      •0•10•2•0•Updated Jan 22, 2025Jan 22, 2025

    • nf-console

      Public
      Console plugin for Nextflow
      Apache License 2.0
      •1•0•1•0•Updated Jan 20, 2025Jan 20, 2025

    • nf-codecommit

      Public
      Amazon CodeCommit plugin for Nextflow
      1•0•0•0•Updated Jan 20, 2025Jan 20, 2025

    • nf-cloudcache

      Public
      Plugin implementing a cache metadata DB over cloud object storage
      Apache License 2.0
      •1•0•0•0•Updated Jan 20, 2025Jan 20, 2025

    • GPars

      Public
      The GPars concurrency and parallelism framework for the JVM
      Groovy
      •
      Other
      •58•0•0•0•Updated Dec 10, 2024Dec 10, 2024

    • rnaseq-nf

      Public
      A proof of concept of RNAseq pipeline
      genomicsnextflowrnaseq
      Nextflow
      •
      Apache License 2.0
      •105•76•6•3•Updated Nov 8, 2024Nov 8, 2024

    • summit

      Public
      Nextflow
      •
      Apache License 2.0
      •0•3•0•0•Updated Oct 21, 2024Oct 21, 2024