University of Bern - ARTORG Center

All

11 repositories

FABCORT
Public
Repository used for the analysis of cortical bone fabric
Shell
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MIT License
•0•0•0•0•Updated Jul 25, 2025Jul 25, 2025
HFE
Public
Homogenized Finite Elements pipeline
abaqus finite-element-methods bone hr-pqct homogenized-finite-elements
Python
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GNU General Public License v3.0
•1•1•0•0•Updated May 20, 2025May 20, 2025
spline_mesher
Public
Meshing tool for homogenised finite elements based on HR-pQCT images
meshing gmsh finite-element-methods bone hexahedral-mesh
Python
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GNU General Public License v3.0
•0•4•4•0•Updated May 20, 2025May 20, 2025
MSB_BMELab
Public
Repository used for the BME labs of the musculo-skeletal biomechanics group
Jupyter Notebook
•0•0•0•0•Updated Apr 25, 2025Apr 25, 2025
FABTIB
Public
Repository used for the project comparing fabric-elasticity relationships between diabetic and healthy individuals
Python
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MIT License
•0•0•0•0•Updated Apr 17, 2025Apr 17, 2025
FEXHIP-Histology
Public
Repository linked to the article "Automatic Segmentation of Cortical Bone Microstructure: Application and Analysis of Three Proximal Femur Sites
Jupyter Notebook
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MIT License
•0•3•0•0•Updated Jan 7, 2025Jan 7, 2025
qam
Public
Library to compute 3D surface-distances for evaluating liver ablation/tumor completeness based on segmentation images.
segmentation radiomics medical-image-analysis euclidean-distances segmentation-evaluation tumor-segmentation liver-disease surface-distances ablation 3d-surface-distances
Python
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GNU General Public License v3.0
•3•2•1•0•Updated Dec 8, 2020Dec 8, 2020
BrainMaterialOptimizationFenics
Public
Repository used for the FEniCS project
Jupyter Notebook
•0•0•0•0•Updated Jun 22, 2020Jun 22, 2020
label-map-warping
Public
Python
•1•0•0•0•Updated Jun 13, 2020Jun 13, 2020
dockerfiles
Public
Collection of dockerfile/singularity setups
docker abaqus cb
Dockerfile
•2•0•0•0•Updated Jan 7, 2020Jan 7, 2020
atracsyswrapper
Public
C++
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MIT License
•0•0•0•0•Updated Aug 29, 2018Aug 29, 2018