DESCRIPTION

Package: protViz
Type: Package
Title: Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
Version: 0.7.9
Authors@R: c(person("Christian", "Panse", email = "cp@fgcz.ethz.ch", role = c("aut", "cre"), 
        comment = c(ORCID = "0000-0003-1975-3064")),
	person("Jonas", "Grossmann", email = "jg@fgcz.ethz.ch", role = "aut",
	comment = c(ORCID = "0000-0002-6899-9020")),
	person("Simon", "Barkow-Oesterreicher", role = "ctb"))
Depends: R (>= 4.1),
	methods
Imports: Rcpp (>= 1.0)
LinkingTo: Rcpp (>= 1.0)
RcppModules: FastaMod 
Suggests:lattice,
	testthat,
	xtable
Description: Helps with quality checks, visualizations 
    and analysis of mass spectrometry data, coming from proteomics 
    experiments. The package is developed, tested and used at the Functional 
    Genomics Center Zurich <https://fgcz.ch>. We use this package
    mainly for prototyping, teaching, and having fun with proteomics data.
    But it can also be used to do data analysis for small scale data sets.
License: GPL-3
URL: https://github.com/cpanse/protViz/
BugReports: https://github.com/cpanse/protViz/issues
Collate: aa2mass.R 
  centroid.R
  comet.R
  deisotoper.R
  de_novo.R 
  findNN.R
  fragmentIon.R 
  genMod.R 
  iTRAQ2GroupAnalysis.R 
  lcmsmap.R 
  mascot.R
  mdp.R
  parentIonMass.R
  peakplot.R
  pepxml.R
  pgImporter.R
  pgLFQ.R
  pp.R
  psm.R
  queue.R
  PTM_MarkerFinder.R
  ssrc.R
  zzz.R
  RcppExports.R
  protViz-package.R
Encoding: UTF-8
LazyData: true
NeedsCompilation: yes
Repository: CRAN