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DESCRIPTION
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Package: protViz
Type: Package
Title: Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
Version: 0.7.9
Authors@R: c(person("Christian", "Panse", email = "[email protected]", role = c("aut", "cre"),
comment = c(ORCID = "0000-0003-1975-3064")),
person("Jonas", "Grossmann", email = "[email protected]", role = "aut",
comment = c(ORCID = "0000-0002-6899-9020")),
person("Simon", "Barkow-Oesterreicher", role = "ctb"))
Depends: R (>= 4.1),
methods
Imports: Rcpp (>= 1.0)
LinkingTo: Rcpp (>= 1.0)
RcppModules: FastaMod
Suggests:lattice,
testthat,
xtable
Description: Helps with quality checks, visualizations
and analysis of mass spectrometry data, coming from proteomics
experiments. The package is developed, tested and used at the Functional
Genomics Center Zurich <https://fgcz.ch>. We use this package
mainly for prototyping, teaching, and having fun with proteomics data.
But it can also be used to do data analysis for small scale data sets.
License: GPL-3
URL: https://github.com/cpanse/protViz/
BugReports: https://github.com/cpanse/protViz/issues
Collate: aa2mass.R
centroid.R
comet.R
deisotoper.R
de_novo.R
findNN.R
fragmentIon.R
genMod.R
iTRAQ2GroupAnalysis.R
lcmsmap.R
mascot.R
mdp.R
parentIonMass.R
peakplot.R
pepxml.R
pgImporter.R
pgLFQ.R
pp.R
psm.R
queue.R
PTM_MarkerFinder.R
ssrc.R
zzz.R
RcppExports.R
protViz-package.R
Encoding: UTF-8
LazyData: true
NeedsCompilation: yes
Repository: CRAN