svtk bioconda 0.0.20190615-6 version raises VariantHeader error

[kubranarci]

Hello,

I am using svtk standardize on a manta file, latest bioconda version (0.0.20190615-6 ) creates the below error while, 0.0.20190615-2 (used docker to run) does not. Can someone help me with this? I cannot define 0.0.20190615-2 exactly in the conda environment since it translate '-' to ;.' somehow.

    > Command error:
    >   [E::bcf_hdr_parse_sample_line] Could not parse the "#CHROM.." line, either FORMAT is missing or spaces are present instead of tabs:
    >   	#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT
    >   
    >   Traceback (most recent call last):
    >     File "pysam/libcbcf.pyx", line 4355, in pysam.libcbcf.VariantFile.open
    >     File "pysam/libcbcf.pyx", line 2210, in pysam.libcbcf.makeVariantHeader
    >   ValueError: cannot create VariantHeader
    >   
    >   During handling of the above exception, another exception occurred:
    >   
    >   Traceback (most recent call last):
    >     File "/home/runner/work/modules/modules/.nf-test/tests/a3decb8bca1847d7fd2e1c1149baba73/work/conda/env-853c99f0b63deee5-9f3c4f680ecea241ac469cb873016a98/bin/svtk", line 67, in <module>
    >       main()
    >     File "/home/runner/work/modules/modules/.nf-test/tests/a3decb8bca1847d7fd2e1c1149baba73/work/conda/env-853c99f0b63deee5-9f3c4f680ecea241ac469cb873016a98/bin/svtk", line 64, in main
    >       getattr(cli, command)(sys.argv[2:])
    >     File "/home/runner/work/modules/modules/.nf-test/tests/a3decb8bca1847d7fd2e1c1149baba73/work/conda/env-853c99f0b63deee5-9f3c4f680ecea241ac469cb873016a98/lib/python3.12/site-packages/svtk/cli/standardize_vcf.py", line 67, in main
    >       template = VariantFile(template)
    >                  ^^^^^^^^^^^^^^^^^^^^^
    >     File "pysam/libcbcf.pyx", line 4117, in pysam.libcbcf.VariantFile.__init__
    >     File "pysam/libcbcf.pyx", line 4357, in pysam.libcbcf.VariantFile.open